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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015907228.1_cds_XP_016457370.1_51103
CDS Infomation

[gene=LOC107781213] [db_xref=GeneID:107781213] [protein=splicing factor U2af large subunit B-like isoform X3] [protein_id=XP_016457370.1] [location=complement(join(22205..22342,22639..22706,22931..23066,23228..23674,24017..24129,24212..24272,25231..25290,25649..25693,25779..25802))] [gbkey=CDS]
Sequence

ATGTTCCCTTTGGCATCTGCACAGCTTGGAGCTATTCCTGTTATGCCAGTCCAGGCAATG
ACTCAGCAGGCAACTAGACATGCAAGGCGAGTTTATGTGGGTGGACTTCCTCCGAGTGCA
AATGAACAGTCAGTGGCTACCTACTTTAATCATGTTATGTCGGCAATTGGTGGAAACACT
GCTGGTCCAGGAGATGCTGTTGTTAATGTTTATATAAACCATGAGAAAAAGTTTGCTTTC
GTTGAGATGAGATCCGTGGAGGAGGCCAGCAATGCCATGGCCTTAGATGGCATTATCTTT
GAGGGAACACAAGTAAAAGTTAGAAGACCAACTGATTATAACCCCTCCCTGGCTGCAACA
CTTGGTCCGAGCCAACCAAATCCAAACCTTAACCTTGCTGCAGTGGGATTATCACCAGGA
TCCACTGGTGGGCTTGAAGGTCCTGACCGTATTTTTGTGGGAGGCCTGCCATACTATTTC
ACTGAAGCTCAGATTAGGGAGTTGCTTGAGTCCTTTGGCCCTCTTCGGGGGTTTAATCTG
GTCAAAGATAAAGAAACTGGAAACTCGAAAGGCTATGCCTTTTGTGTTTACTCTGACGTG
TCTGTTACAGATATTGCATGTGCAGCTCTTAATGGGATTAAGATGGGTGATAAAACTCTT
ACTGTCAGACGTGCAAGTCAAGGTACTTTACAGCCTAAGCCAGAGCAGGAGAGTATATTA
ATGCATGCTCAGCAACAAATAGCACTGCAGAGACTCATGCTACAACCTGGTGGACCTCCT
ACTAAAGTCTTATGCCTAACAAATGTGGTTAGCGCGGATGAGCTCAAAGATGATGAAGAC
TATGAAGATATAGTGGAAGATATGAGAACTGAATGCGGGAAATTTGGTAATTTAGTGAGT
TTAGTCATCCCACGCCCAAGGCCTGATGGTGAACCGACACCAGGGGTTGGAAAGGTCTTT
TTGGAGTACACGGATGTGGAGGGTTCCTCGAGAGCTCAACAAGGATTGAATGGCAGAAAA
TTCGGAGGAAACCCAGTTGTTGCTGTCTTTTATTCGGAGAACAAGTTCTCTGAGGGGGAC
TACGAGGGCTAG

Peptide Sequence

PEP ID

XP_016457370.1
PEP Infomation

PREDICTED: splicing factor U2af large subunit B-like isoform X3 [Nicotiana tabacum]
Sequence

MFPLASAQLGAIPVMPVQAMTQQATRHARRVYVGGLPPSANEQSVATYFNHVMSAIGGNT
AGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGTQVKVRRPTDYNPSLAAT
LGPSQPNPNLNLAAVGLSPGSTGGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFNL
VKDKETGNSKGYAFCVYSDVSVTDIACAALNGIKMGDKTLTVRRASQGTLQPKPEQESIL
MHAQQQIALQRLMLQPGGPPTKVLCLTNVVSADELKDDEDYEDIVEDMRTECGKFGNLVS
LVIPRPRPDGEPTPGVGKVFLEYTDVEGSSRAQQGLNGRKFGGNPVVAVFYSENKFSEGD
YEG

Transcript Sequence

Gene sequence data has not been registered.